![]() ![]() I’m not sure if the strategy I’m currently using is the correct one. Ideally I’d like to be able to compile the Stan model in my local environment and upload this to the directory I use while using the cluster. I would greatly appreciate any advice on what I might be doing wrong. Make: *** Error 253Įrror: An error occured during compilation! See the message above for more information. This results in a syntax error, as seen below, I suppose since my stan code is using the syntax from cmdstanr that the older compiler might not understand? SYNTAX ERROR, MESSAGE(S) FROM PARSER:Įrror in '/var/folders/8w/byg0q9bx7r9bk20hswzlnh700000gn/T/RtmpnWDJlA/model-6b1d2dd99afc.stan' at line 205, column 10 I have previously attempted various other workarounds, including using the stanc2 compiler instead (as suggested here CmdStan on ARM error - #6 by asceles) while compiling the model on the cluster instead of my local environment. > file compile_mod # fit the model to the data However, when I run this programme on Terminal, I run into the following problem: > set_cmdstan_path("/storage/users/gmilne/test/.cmdstanr/cmdstan-2.25.0")ĬmdStan path set to: /storage/users/gmilne/test/.cmdstanr/cmdstan-2.25.0 exe file to the directory that I use when on the cluster. To try to overcome various problems I have encountered while trying to run the same programme on a computer cluster using Terminal, I have compiled the stan model in my local environment, then moved the resulting. I have a cmdstanr programme that runs in R studio but doesn’t run on a computer cluster via MacOS Terminal. ![]()
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